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Changelog

Source: NEWS.md

occCite 0.5.9

  • Commented out dependencies on taxize package. Taxonomic rectification no longer works. It will be reinstated if taxize becomes available on CRAN.

occCite 0.5.8

CRAN release: 2024-09-05

  • Moved taxize package to Suggests, as it is now orphaned.
  • studyTaxonList() allows user to skip taxonomic rectification, which relies on functions from taxize package. studyTaxonList() automatically skips taxonomic rectification if taxize is unavailable.

occCite 0.5.7

CRAN release: 2024-06-23

  • Fixed warning in occCitation() when getting GBIF citations
  • Updated date formatting using format() instead of as.character()
  • Updated test files to incorporate rgbif 3.8.0 output changes, make more efficient
  • In occResults, renamed “Dataset”, “DatasetKey”, and “DataService” to “datasetName”, “datasetKey”, “dataService”, respectively.
  • Made an option for removing package citations

occCite 0.5.6

CRAN release: 2022-08-05

  • Added “coordinateUncertaintyInMeters” column in processed occurrence results table.

occCite 0.5.5

  • Further adjustment in testing to be CRAN-compatible

occCite 0.5.4

CRAN release: 2022-03-21

  • Adjustment to testing strategy to comply with CRAN policies.
  • Links changed to reflect inclusion on ROpenSci.

occCite 0.5.2

CRAN release: 2022-03-04

  • Resubmission after archiving due to dependency archiving.
  • Functions that rely on getting data from servers via an internet connection now behave more gracefully and informatively when the server cannot be reached.

occCite 0.5.1

CRAN release: 2021-11-01

  • Minor update to fix a server connection timeout error.

occCite 0.5.0

CRAN release: 2021-10-13

  • Legends for source waffle plots are now wrapped to enhance readability.
  • Now fails more gracefully if servers cannot be reached.

occCite 0.4.9

CRAN release: 2021-07-23

  • In gbifRetriever, changed rgbif::name_suggests to rgbif::name_backbone. More robust for our purposes.
  • Now fills in “Dataset” column in GBIF search results from GBIF citation information.
  • No longer throws out GBIF occurrences with missing day and month information.

occCite 0.4.8

CRAN release: 2021-06-11

  • Fixed problem with occCitation that caused an error when dataset keys had no associated BIEN data.

occCite 0.4.7

CRAN release: 2021-04-27

  • Internal logic made more robust to various error scenarios.
  • Now warns user if no taxonomic matches exist for a given name (but doesn’t crash!).

occCite 0.4.6

CRAN release: 2021-02-21

  • Taxonomic sources were renamed in the Global Names Resolver.

occCite 0.4.5

CRAN release: 2020-11-28

  • sumFig() function is now a plot method for objects of class occCiteData.
  • map.occCite() has been renamed occCiteMap() to avoid confusion with existing method naming conventions.

occCite 0.4.0

CRAN release: 2020-10-21

  • Removed a package dependency that was causing warnings on some systems.
  • Adjusted function behaviors to more gracefully handle species with no occurrences returned from a search.

occCite 0.3.0

CRAN release: 2020-10-06

  • Updated to meet CRAN reviewer guidelines
  • Citations now include packages used.

occCite 0.2.0

  • Updated to reflect new object structures returned by searches with update rgbif, version 3.1.
  • Examples updated to permit testing when possible.

occCite 0.1.0

  • Version submitted for evaluation in Ebbe Nielsen Challenge.

occCite 0.0.0

  • The package now works.