Convert taxon IDs to scientific ranks

taxid2rank(x, db = "ncbi", verbose = TRUE, warn = TRUE, ...)

Arguments

x	(character) Vector of taxon keys (name or id) for the given database
db	(character) The database to search, one of ncbi, itis, gbif, col, or wfo
verbose	(logical) Print verbose messages
warn	(logical) If `TRUE`, raise a warning if any taxon IDs can not be found
...	Additional arguments passed to database specific classification functions

Value

character vector of ranks in the same order as the inputs

Examples

if (FALSE) {
taxid2rank(c(3701, 9606))
taxid2rank(c(154395, 154357, 23041, 154396), db="itis")
taxid2rank(c('wfo-4000032377', 'wfo-0000541830'), db="wfo")
taxid2rank("wfo-7000000057", db="wfo")
taxid2rank(2877951, db="gbif")
taxid2rank(c(2877951, 5386), db="gbif")
taxid2rank(c(3960765, 3953606, 3953010), db="col")
}