Construct search term for searching GenBank's nucleotide database. Limits the maximum size of sequences, avoids whole genome shotguns, predicted, unverified and synthetic sequences.

searchterm_gen(txid, ps, direct = FALSE)

Arguments

txid

Taxonomic ID

ps

Parameters list, generated with parameters()

direct

Node-level only or subtree as well? Default FALSE.

Value

character, search term

See also