Return BLAST results from BLASTing all vs all for given sequences. Returns NULL if no BLAST results generated.

blast_sqs(txid, typ, sqs, ps, lvl)

Arguments

txid

Taxonomic node ID, numeric

typ

Cluster type, 'direct' or 'subtree'

sqs

Sequences

ps

Parameters list, generated with parameters()

lvl

Integer, number of message indentations indicating code depth.

Value

blast_res data.frame or NULL

See also