Clique Percolation Method (with node names) — clique_community

Function to determine communities in a network using clique percolation method (Palla et al., 2005). Communities are created based on cliques. Cliques are subsets of a network that can be considered complete (sub)networks. The size of the cliques to be used to community detection is part of the input of the function.

Usage

clique_community_names(g, k = 3)

Arguments

g: network object (igraph)
k: clique size to be used. The default is set to smallest possible size (3)

Value

a dataframe with node names and community name. The community is named as CPM_Kk_number_of_community with k replaced by the value of k.

References

Palla, G., Derényi, I., Farkas, I., & Vicsek, T. (2005). Uncovering the overlapping community structure of complex networks in nature and society. Nature, 435(7043), 814-818.

Code adapted from source: https://github.com/angelosalatino/CliquePercolationMethod-R/blob/master/clique.community.R

Author

Angelo Salatino

Ronald Visser

Examples

hol_sim <- sim_table(hol_rom)
g_hol <- dendro_network(hol_sim)
clique_community_names(g_hol, k = 3)
#>        node com_name
#> 1 HOL_LKBBH CPM_K3_1
#> 2 HOL_MBRUH CPM_K3_1
#> 3 HOL_MRBRH CPM_K3_1